Explore sequence, structure,
and function relationships

With MODexplorer you can:

Starting from a protein sequence or structure

  • Visualize the alignments to homologous proteins with known structure
  • Map structural and functional annotations
  • Explore structural and functional features of the homologs
  • Select templates and perform homology modeling

Protein input form - [Autofill it with an example]

Choose input type Sequence Structure
Autofill with a sample sequence Download a sample file
MODexplorer uses Modeller. A default license key is provided. We strongly encourage to use your personal Modeller key (FAQ:How to get Modeller key?) so that the developers can keep track of their users.

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If you use this web server, please cite the following reference:

  • Kosinski, J., Barbato, A., Tramontano, A. MODexplorer: an integrated tool for exploring protein sequence, structure and function relationships (2013) Bioinformatics, 29(7):953-4 [article]